BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027A02LP1|AL428640
(902 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1303 1788 0.0
>3x_Contig1303
Length = 8112
Score = 1788 bits (902), Expect = 0.0
Identities = 902/902 (100%)
Strand = Plus / Minus
Query: 1 aaacggaaatcatggtctcttgaaacattgtacctggctcatctaatattaaggttagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3613 aaacggaaatcatggtctcttgaaacattgtacctggctcatctaatattaaggttagaa 3554
Query: 61 tcagacaaatcagaaaaacttctggttgacatttgactcagatcacctttataggacaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3553 tcagacaaatcagaaaaacttctggttgacatttgactcagatcacctttataggacaaa 3494
Query: 121 ctttgaattgaaaagcgccagtggattttcctttgtggtttttggttatggaccatttct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3493 ctttgaattgaaaagcgccagtggattttcctttgtggtttttggttatggaccatttct 3434
Query: 181 ttggggctctaaaggcaggtgattttagtgtattggatataaacatcgaaagaaatggac 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3433 ttggggctctaaaggcaggtgattttagtgtattggatataaacatcgaaagaaatggac 3374
Query: 241 aattaattcttgaattgcaacagtttttgagatccaatgacagcattgaccttgagaccc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3373 aattaattcttgaattgcaacagtttttgagatccaatgacagcattgaccttgagaccc 3314
Query: 301 tgataaattcacattctctttatgagaacagatggaccaggtttaataatttggtaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3313 tgataaattcacattctctttatgagaacagatggaccaggtttaataatttggtaagtt 3254
Query: 361 catttcttgggtactgtaaagaactgaatccatattcattatgggaatcgtccttctctg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3253 catttcttgggtactgtaaagaactgaatccatattcattatgggaatcgtccttctctg 3194
Query: 421 tgttccaatattaccaggatttgaatacatgtctcacaaacgagacaacaatgtacccta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3193 tgttccaatattaccaggatttgaatacatgtctcacaaacgagacaacaatgtacccta 3134
Query: 481 ttgattctttggtaccactgtttacagctacaacagaattggtcattccaatggctatta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3133 ttgattctttggtaccactgtttacagctacaacagaattggtcattccaatggctatta 3074
Query: 541 gattggatgctaaccataagatcattggtacaagacagcatcagtttctgacccatattg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3073 gattggatgctaaccataagatcattggtacaagacagcatcagtttctgacccatattg 3014
Query: 601 cttccatcatttccaaattgttcaatagcattaaagccagggtcgatgatgataaggtcg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3013 cttccatcatttccaaattgttcaatagcattaaagccagggtcgatgatgataaggtcg 2954
Query: 661 aatttgatcatttgtcagggaaacagaaggtcttgctttatatttcaaacaaattgaaca 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2953 aatttgatcatttgtcagggaaacagaaggtcttgctttatatttcaaacaaattgaaca 2894
Query: 721 tgatttatttcaagattaactccccatcttcgtgcgctaacatcttcaagaatttgaaac 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2893 tgatttatttcaagattaactccccatcttcgtgcgctaacatcttcaagaatttgaaac 2834
Query: 781 caaagtctaatatctattcgttcaaccaatacccgttgacagagagaatccagtataggt 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2833 caaagtctaatatctattcgttcaaccaatacccgttgacagagagaatccagtataggt 2774
Query: 841 attacttggggagatattacctattaaaccatagaatggttaatgctttccatcagttga 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2773 attacttggggagatattacctattaaaccatagaatggttaatgctttccatcagttga 2714
Query: 901 ac 902
||
Sbjct: 2713 ac 2712
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 8289
Number of Sequences: 1807
Number of extensions: 8289
Number of successful extensions: 59
Number of sequences better than 1.0e-20: 1
length of query: 902
length of database: 10,358,551
effective HSP length: 16
effective length of query: 886
effective length of database: 10,329,639
effective search space: 9152060154
effective search space used: 9152060154
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)